PLAZA 3.0 Monocots gene overview : CP26338G00010

Gene: CP26338G00010 (Carica papaya)

Overview

Gene Identifier: CP26338G00010
Transcript Identifier: CP26338G00010.1
Gene Type: Coding gene
Location: contig_26338 : 13114-25843 : positive

Family

Gene family: HOM03M002105
(39 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): ATPase regulatory subunit 2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.contig_26338.1

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0042176	IEA	Genome Project	regulation of protein catabolic process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0030234	IEA	Genome Project	enzyme regulator activity
GO:0005488	IEA	Genome Project	binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0000502	IEA	Genome Project	proteasome complex

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016643	26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit
IPR016024	Armadillo-type fold
IPR002015	Proteasome/cyclosome repeat
IPR011989	Armadillo-like helical

Mapman id	Description
29.5.11.20	protein.degradation.ubiquitin.proteasom

No SignalP domains detected for this gene.