PLAZA 3.0 Monocots gene overview : CP01066G00010

Gene: CP01066G00010 (Carica papaya)

Overview

Gene Identifier: CP01066G00010
Transcript Identifier: CP01066G00010.1
Gene Type: Coding gene
Location: supercontig_1066 : 11467-15655 : positive

Family

Gene family: HOM03M000071
(625 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): Probable transcription factor KAN2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_1066.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006355	IEA	Genome Project	regulation of transcription, DNA-dependent
GO:0010158	ISO	PLAZA Integrative Orthology	abaxial cell fate specification	OS09G23200
GO:0010229	ISO	PLAZA Integrative Orthology	inflorescence development	OS09G23200

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	IEA	Genome Project	DNA binding
GO:0003682	IEA	InterPro	chromatin binding
GO:1901363	IEA	PLAZA Homology	heterocyclic compound binding	HOM03M000071
GO:0097159	IEA	PLAZA Homology	organic cyclic compound binding	HOM03M000071
GO:0003676	IEA	PLAZA Homology	nucleic acid binding	HOM03M000071

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	OS09G23200

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009057	Homeodomain-like
IPR001005	SANT/Myb domain
IPR006447	Myb domain, plants

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.

Database	Type
PlnTFDB	G2-like