Gene: CP01021G00010 (Carica papaya)

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Gene Identifier
CP01021G00010
Transcript Identifier
CP01021G00010.1
Gene Type
Coding gene
Location
supercontig_1021 : 14791-17727 : positive

Family

Gene family
HOM03M001250
(59 genes in 13 species)
specific family
Subfamily
ORTHO03M012039
(4 genes in 4 species)
specific family

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Descriptions

Description (AnnoMine)
VIN3-like protein 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_1021.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0001666ISOPLAZA Integrative Orthologyresponse to hypoxiaAT5G57380
GO:0070417ISOPLAZA Integrative Orthologycellular response to coldAT5G57380 AT2G18880
GO:0061087ISOPLAZA Integrative Orthologypositive regulation of histone H3-K27 methylationAT5G57380 AT3G24440
GO:0051571ISOPLAZA Integrative Orthologypositive regulation of histone H3-K4 methylationAT5G57380 AT3G24440
GO:0045814ISOPLAZA Integrative Orthologynegative regulation of gene expression, epigeneticAT5G57380 AT3G24440
GO:0010048ISOPLAZA Integrative Orthologyvernalization responseAT5G57380 AT3G24440
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT5G57380 AT4G30200 AT3G24440 AT2G18880
GO:1900111ISOPLAZA Integrative Orthologypositive regulation of histone H3-K9 dimethylationAT4G30200
GO:0048587ISOPLAZA Integrative Orthologyregulation of short-day photoperiodism, floweringAT4G30200
GO:0032922ISOPLAZA Integrative Orthologycircadian regulation of gene expressionAT4G30200
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT4G30200
GO:0048575ISOPLAZA Integrative Orthologyshort-day photoperiodism, floweringAT3G24440
GO:0048572ISOPLAZA Integrative Orthologyshort-day photoperiodismAT3G24440
GO:0016571ISOPLAZA Integrative Orthologyhistone methylationAT3G24440
GO:0016568ISOPLAZA Integrative Orthologychromatin modificationAT3G24440
GO:0009909ISOPLAZA Integrative Orthologyregulation of flower developmentAT3G24440

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0035064ISOPLAZA Integrative Orthologymethylated histone residue bindingAT4G30200
GO:0042802ISOPLAZA Integrative Orthologyidentical protein bindingAT4G30200

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005677ISOPLAZA Integrative Orthologychromatin silencing complexAT5G57380 AT4G30200 AT3G24440
GO:0016607ISOPLAZA Integrative Orthologynuclear speckAT5G57380 AT3G24440
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G57380 AT3G24440
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G30200
GO:0031519ISOPLAZA Integrative OrthologyPcG protein complexAT4G30200

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003961Fibronectin, type III
IPR013783Immunoglobulin-like fold

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.