PLAZA 3.0 Monocots gene overview : CP00932G00030

Gene: CP00932G00030 (Carica papaya)

Overview

Gene Identifier: CP00932G00030
Transcript Identifier: CP00932G00030.1
Gene Type: Coding gene
Location: supercontig_932 : 6523-8690 : negative

Family

Gene family: HOM03M000121
(382 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): ADP-ribosylation factor

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_932.3

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0007264	IEA	Genome Project	small GTPase mediated signal transduction
GO:0015031	IEA	InterPro	protein transport
GO:0006886	IEA	InterPro	intracellular protein transport
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT1G70490 AT1G23490 AT1G10630
GO:0051716	IEA	PLAZA Homology	cellular response to stimulus	HOM03M000121
GO:0051234	IEA	PLAZA Homology	establishment of localization	HOM03M000121
GO:0045184	IEA	PLAZA Homology	establishment of protein localization	HOM03M000121
GO:0035556	IEA	PLAZA Homology	intracellular signal transduction	HOM03M000121
GO:0051641	IEA	PLAZA Homology	cellular localization	HOM03M000121
GO:0008104	IEA	PLAZA Homology	protein localization	HOM03M000121
GO:0007154	IEA	PLAZA Homology	cell communication	HOM03M000121
GO:0050789	IEA	PLAZA Homology	regulation of biological process	HOM03M000121
GO:0006810	IEA	PLAZA Homology	transport	HOM03M000121
GO:0051649	IEA	PLAZA Homology	establishment of localization in cell	HOM03M000121
GO:0033036	IEA	PLAZA Homology	macromolecule localization	HOM03M000121
GO:0070727	IEA	PLAZA Homology	cellular macromolecule localization	HOM03M000121
GO:0023052	IEA	PLAZA Homology	signaling	HOM03M000121
GO:0065007	IEA	PLAZA Homology	biological regulation	HOM03M000121
GO:0046907	IEA	PLAZA Homology	intracellular transport	HOM03M000121
GO:0007165	IEA	PLAZA Homology	signal transduction	HOM03M000121
GO:0050794	IEA	PLAZA Homology	regulation of cellular process	HOM03M000121
GO:0044700	IEA	PLAZA Homology	single organism signaling	HOM03M000121
GO:0034613	IEA	PLAZA Homology	cellular protein localization	HOM03M000121
GO:0071702	IEA	PLAZA Homology	organic substance transport	HOM03M000121
GO:0050896	IEA	PLAZA Homology	response to stimulus	HOM03M000121
GO:0051179	IEA	PLAZA Homology	localization	HOM03M000121

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005525	IEA	Genome Project	GTP binding
GO:0016004	ISO	PLAZA Integrative Orthology	phospholipase activator activity	AT5G14670 AT3G62290 AT2G47170 AT1G70490 AT1G23490 AT1G10630
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G23490
GO:0005507	ISO	PLAZA Integrative Orthology	copper ion binding	AT1G10630
GO:0032555	IEA	PLAZA Homology	purine ribonucleotide binding	HOM03M000121
GO:0043168	IEA	PLAZA Homology	anion binding	HOM03M000121
GO:0032553	IEA	PLAZA Homology	ribonucleotide binding	HOM03M000121
GO:0035639	IEA	PLAZA Homology	purine ribonucleoside triphosphate binding	HOM03M000121
GO:0097367	IEA	PLAZA Homology	carbohydrate derivative binding	HOM03M000121
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03M000121
GO:0000166	IEA	PLAZA Homology	nucleotide binding	HOM03M000121
GO:0001882	IEA	PLAZA Homology	nucleoside binding	HOM03M000121
GO:0032561	IEA	PLAZA Homology	guanyl ribonucleotide binding	HOM03M000121
GO:0017076	IEA	PLAZA Homology	purine nucleotide binding	HOM03M000121
GO:0036094	IEA	PLAZA Homology	small molecule binding	HOM03M000121
GO:0032549	IEA	PLAZA Homology	ribonucleoside binding	HOM03M000121
GO:0019001	IEA	PLAZA Homology	guanyl nucleotide binding	HOM03M000121
GO:0001883	IEA	PLAZA Homology	purine nucleoside binding	HOM03M000121
GO:0032550	IEA	PLAZA Homology	purine ribonucleoside binding	HOM03M000121

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005622	IEA	Genome Project	intracellular
GO:0005794	ISO	PLAZA Integrative Orthology	Golgi apparatus	AT5G14670 AT3G62290 AT2G47170 AT1G70490 AT1G23490 AT1G10630
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT3G62290
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT3G62290 AT1G70490 AT1G23490 AT1G10630
GO:0005798	ISO	PLAZA Integrative Orthology	Golgi-associated vesicle	AT2G47170
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT1G70490 AT1G23490 AT1G10630
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G10630
GO:0016020	ISO	PLAZA Integrative Orthology	membrane	AT1G10630
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT1G10630

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006689	Small GTPase superfamily, ARF/SAR type
IPR003579	Small GTPase superfamily, Rab type
IPR006687	Small GTPase superfamily, SAR1-type
IPR005225	Small GTP-binding protein domain
IPR024156	Small GTPase superfamily, ARF type
IPR027417	P-loop containing nucleoside triphosphate hydrolase

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.