Gene: CP00544G00040 (Carica papaya)

Overview top

Gene Identifier
CP00544G00040
Transcript Identifier
CP00544G00040.1
Gene Type
Coding gene
Location
supercontig_544 : 11422-14061 : negative

Family

Gene family
HOM03M007214
(14 genes in 13 species)
specific family

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Descriptions

Description (AnnoMine)
Transcription initiation factor IIB
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_544.4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0006352IEAGenome ProjectDNA-dependent transcription, initiation
GO:0006413IEAGenome Projecttranslational initiation
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M007214

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003743IEAGenome Projecttranslation initiation factor activity
GO:0005515IEAGenome Projectprotein binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0017025IEAInterProTBP-class protein binding
GO:0000182ISOPLAZA Integrative OrthologyrDNA bindingAT4G36650

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0005667IEAGenome Projecttranscription factor complex
GO:0009527ISOPLAZA Integrative Orthologyplastid outer membraneAT4G36650

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013763Cyclin-like
IPR013150Transcription factor TFIIB, cyclin-like domain
IPR000812Transcription factor TFIIB

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.