Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene: CP00353G00030 (Carica papaya)
Overview 
- Gene Identifier
- CP00353G00030
- Transcript Identifier
- CP00353G00030.1
- Gene Type
- Coding gene
- Location
- supercontig_353 : 117794-123132 : positive
Family
- Gene family
Descriptions
- Description (AnnoMine)
-
Splicing factor U2af large subunit
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| pid | evm.TU.supercontig_353.3 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006397 | IEA | Genome Project | mRNA processing | |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT4G36690 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003723 | IEA | Genome Project | RNA binding | |
| GO:0000166 | IEA | Genome Project | nucleotide binding | |
| GO:0003676 | IEA | Genome Project | nucleic acid binding | |
| GO:1901265 | IEA | PLAZA Homology | nucleoside phosphate binding | HOM03M001462 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | IEA | Genome Project | nucleus |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.