PLAZA 3.0 Monocots gene overview : CP00245G00180

Gene: CP00245G00180 (Carica papaya)

Overview

Gene Identifier: CP00245G00180
Transcript Identifier: CP00245G00180.1
Gene Type: Coding gene
Location: supercontig_245 : 298739-303714 : positive

Family

Gene family: HOM03M004667
(21 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): synthase subunit O, mitochondrial

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_245.18

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0015986	IEA	Genome Project	ATP synthesis coupled proton transport
GO:0015985	IEA	PLAZA Homology	energy coupled proton transport, down electrochemical gradient	HOM03M004667

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0046961	IEA	Genome Project	proton-transporting ATPase activity, rotational mechanism
GO:0046933	IEA	Genome Project	proton-transporting ATP synthase activity, rotational mechanism
GO:0008270	ISO	PLAZA Integrative Orthology	zinc ion binding	AT5G13450
GO:0050897	ISO	PLAZA Integrative Orthology	cobalt ion binding	AT5G13450

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0045261	IEA	Genome Project	proton-transporting ATP synthase complex, catalytic core F(1)
GO:0016020	IEA	InterPro	membrane
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT5G13450
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT5G13450
GO:0005753	ISO	PLAZA Integrative Orthology	mitochondrial proton-transporting ATP synthase complex	AT5G13450
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT5G13450

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain
IPR000711	ATPase, F1 complex, OSCP/delta subunit
IPR020781	ATPase, F1 complex, OSCP/delta subunit, conserved site

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.