Gene: CP00188G00070 (Carica papaya)

Overview top

Gene Identifier
CP00188G00070
Transcript Identifier
CP00188G00070.1
Gene Type
Coding gene
Location
supercontig_188 : 226535-237719 : positive

Family

Gene family
HOM03M001537
(50 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Putative transcription elongation factor SPT5 homolog 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_188.7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0032968IEAGenome Projectpositive regulation of transcription elongation from RNA polymerase II promoter
GO:0006412IEAGenome Projecttranslation
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M001537
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M001537

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735IEAGenome Projectstructural constituent of ribosome

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005840IEAGenome Projectribosome
GO:0005622IEAGenome Projectintracellular

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005824KOW
IPR014722Ribosomal protein L2 domain 2
IPR008991Translation protein SH3-like domain
IPR005825Ribosomal protein L24/L26, conserved site
IPR005100Transcription elongation factor Spt5, NGN domain
IPR006645Transcription antitermination protein NusG, N-terminal domain
IPR022581Spt5 transcription elongation factor, N-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.