Gene: CP00180G00120 (Carica papaya)

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Gene Identifier
CP00180G00120
Transcript Identifier
CP00180G00120.1
Gene Type
Coding gene
Location
supercontig_180 : 190727-201360 : positive

Family

Gene family
HOM03M004805
(20 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine)
transcription factor complex helicase XPB subunit
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_180.12

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006289IEAGenome Projectnucleotide-excision repair
GO:0009411ISOPLAZA Integrative Orthologyresponse to UVAT5G41370
GO:0009636ISOPLAZA Integrative Orthologyresponse to toxic substanceAT5G41370
GO:0010224ISOPLAZA Integrative Orthologyresponse to UV-BAT5G41360

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0016787IEAGenome Projecthydrolase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004386IEAGenome Projecthelicase activity
GO:0004003IEAGenome ProjectATP-dependent DNA helicase activity
GO:0003676IEAGenome Projectnucleic acid binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G41370
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G41370

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001161Helicase Ercc3
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR006935Helicase/UvrB domain
IPR001650Helicase, C-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.