Gene: CP00167G00100 (Carica papaya)

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Gene Identifier
CP00167G00100
Transcript Identifier
CP00167G00100.1
Gene Type
Coding gene
Location
supercontig_167 : 158768-189893 : positive

Family

Gene family
HOM03M003314
(27 genes in 16 species)
specific family
Subfamily
ORTHO03M012454
(4 genes in 4 species)
specific family

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Descriptions

Description (AnnoMine)
Formamidopyrimidine-DNA glycosylase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_167.10

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAGenome ProjectDNA repair
GO:0006284IEAGenome Projectbase-excision repair
GO:0006289IEAGenome Projectnucleotide-excision repair
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT1G52500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003906IEAGenome ProjectDNA-(apurinic or apyrimidinic site) lyase activity
GO:0016799IEAGenome Projecthydrolase activity, hydrolyzing N-glycosyl compounds
GO:0003676IEAGenome Projectnucleic acid binding
GO:0003684IEAGenome Projectdamaged DNA binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0008534IEAGenome Projectoxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0019104ISOPLAZA Integrative OrthologyDNA N-glycosylase activityAT1G52500
GO:0000702IEAPLAZA Homologyoxidized base lesion DNA N-glycosylase activityHOM03M003314

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015886DNA glycosylase/AP lyase, H2TH DNA-binding
IPR000191DNA glycosylase/AP lyase
IPR010979Ribosomal protein S13-like, H2TH
IPR012319DNA glycosylase/AP lyase, catalytic domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.