PLAZA 3.0 Monocots gene overview : CP00166G00300

Gene: CP00166G00300 (Carica papaya)

Overview

Gene Identifier: CP00166G00300
Transcript Identifier: CP00166G00300.1
Gene Type: Coding gene
Location: supercontig_166 : 251715-256143 : positive

Family

Gene family: HOM03M001286
(58 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): root-type isozyme, chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_166.30

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	Genome Project	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0050661	IEA	Genome Project	NADP binding
GO:0009055	IEA	Genome Project	electron carrier activity
GO:0050660	IEA	Genome Project	flavin adenine dinucleotide binding
GO:0004324	IEA	Genome Project	ferredoxin-NADP+ reductase activity
GO:0016491	IEA	Genome Project	oxidoreductase activity
GO:0005507	ISO	PLAZA Integrative Orthology	copper ion binding	AT4G05390 AT1G30510

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0042651	IEA	Genome Project	thylakoid membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001709	Flavoprotein pyridine nucleotide cytochrome reductase
IPR017938	Riboflavin synthase-like beta-barrel
IPR017927	Ferredoxin reductase-type FAD-binding domain
IPR001433	Oxidoreductase FAD/NAD(P)-binding
IPR015701	Ferredoxin--NADP reductase

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.