Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene: CP00166G00260 (Carica papaya)
Overview 
- Gene Identifier
- CP00166G00260
- Transcript Identifier
- CP00166G00260.1
- Gene Type
- Coding gene
- Location
- supercontig_166 : 193808-199501 : negative
Family
- Gene family
Descriptions
- Description (AnnoMine)
-
Zygotic DNA replication licensing factor mcm3
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| pid | evm.TU.supercontig_166.26 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006260 | IEA | Genome Project | DNA replication | |
| GO:0006270 | IEA | Genome Project | DNA replication initiation | |
| GO:0006268 | ISO | PLAZA Integrative Orthology | DNA unwinding involved in DNA replication | AT5G46280 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003677 | IEA | Genome Project | DNA binding | |
| GO:0005524 | IEA | Genome Project | ATP binding | |
| GO:0000166 | IEA | Genome Project | nucleotide binding | |
| GO:0017111 | IEA | Genome Project | nucleoside-triphosphatase activity | |
| GO:0003678 | IEA | InterPro | DNA helicase activity |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | IEA | Genome Project | nucleus | |
| GO:0042555 | IEA | InterPro | MCM complex |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| InterPro | Description |
|---|---|
| IPR003593 | AAA+ ATPase domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR008046 | DNA replication licensing factor Mcm3 |
| IPR001208 | Mini-chromosome maintenance, DNA-dependent ATPase |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR018525 | Mini-chromosome maintenance, conserved site |
| IPR027925 | MCM N-terminal domain |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.