PLAZA 3.0 Monocots gene overview : CP00157G00690

Gene: CP00157G00690 (Carica papaya)

Overview

Gene Identifier: CP00157G00690
Transcript Identifier: CP00157G00690.1
Gene Type: Coding gene
Location: supercontig_157 : 447264-455675 : negative

Family

Gene family: HOM03M000116
(393 genes in 16 species)
specific family
Subfamily: ORTHO03M000304
(17 genes in 10 species)
specific family

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Descriptions

Description (AnnoMine): Ultraviolet-B receptor UVR8

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_157.69

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008270	IEA	Genome Project	zinc ion binding
GO:0046872	IEA	InterPro	metal ion binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT1G65920
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT1G65920

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000306	FYVE zinc finger
IPR013591	Brevis radix (BRX) domain
IPR000408	Regulator of chromosome condensation, RCC1
IPR011011	Zinc finger, FYVE/PHD-type
IPR017455	Zinc finger, FYVE-related
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR027988	Transcription factor BREVIS RADIX, N-terminal domain
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR011993	Pleckstrin homology-like domain

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.