PLAZA 3.0 Monocots gene overview : CP00146G00120

Gene: CP00146G00120 (Carica papaya)

Overview

Gene Identifier: CP00146G00120
Transcript Identifier: CP00146G00120.1
Gene Type: Coding gene
Location: supercontig_146 : 53485-59208 : positive

Family

Gene family: HOM03M000104
(463 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): annealing helicase and endonuclease ZRANB3

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_146.12

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Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0004386	IEA	Genome Project	helicase activity
GO:0003676	IEA	Genome Project	nucleic acid binding
GO:0032555	IEA	PLAZA Homology	purine ribonucleotide binding	HOM03M000104
GO:0016817	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides	HOM03M000104
GO:0032553	IEA	PLAZA Homology	ribonucleotide binding	HOM03M000104
GO:0035639	IEA	PLAZA Homology	purine ribonucleoside triphosphate binding	HOM03M000104
GO:0097367	IEA	PLAZA Homology	carbohydrate derivative binding	HOM03M000104
GO:0016818	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	HOM03M000104
GO:0032559	IEA	PLAZA Homology	adenyl ribonucleotide binding	HOM03M000104
GO:0016462	IEA	PLAZA Homology	pyrophosphatase activity	HOM03M000104
GO:0030554	IEA	PLAZA Homology	adenyl nucleotide binding	HOM03M000104
GO:0001882	IEA	PLAZA Homology	nucleoside binding	HOM03M000104
GO:0017076	IEA	PLAZA Homology	purine nucleotide binding	HOM03M000104
GO:0017111	IEA	PLAZA Homology	nucleoside-triphosphatase activity	HOM03M000104
GO:0032549	IEA	PLAZA Homology	ribonucleoside binding	HOM03M000104
GO:0003677	IEA	PLAZA Homology	DNA binding	HOM03M000104
GO:0001883	IEA	PLAZA Homology	purine nucleoside binding	HOM03M000104
GO:0032550	IEA	PLAZA Homology	purine ribonucleoside binding	HOM03M000104

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001650	Helicase, C-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.