Gene: CP00125G00090 (Carica papaya)

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Gene Identifier
CP00125G00090
Transcript Identifier
CP00125G00090.1
Gene Type
Coding gene
Location
supercontig_125 : 241951-245397 : positive

Family

Gene family
HOM03M000089
(508 genes in 14 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Polygalacturonase QRT2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_125.9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process
GO:0045490ISOPLAZA Integrative Orthologypectin catabolic processAT3G07970
GO:0048235ISOPLAZA Integrative Orthologypollen sperm cell differentiationAT3G07970
GO:0010047ISOPLAZA Integrative Orthologyfruit dehiscenceAT3G07970
GO:0009901ISOPLAZA Integrative Orthologyanther dehiscenceAT3G07970
GO:0009830ISOPLAZA Integrative Orthologycell wall modification involved in abscissionAT3G07970
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000089

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004650IEAGenome Projectpolygalacturonase activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000089
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03M000089
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03M000089

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006626Parallel beta-helix repeat
IPR000743Glycoside hydrolase, family 28
IPR011050Pectin lyase fold/virulence factor
IPR012334Pectin lyase fold

No MapMan annotations defined for this gene.
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network