PLAZA 3.0 Monocots gene overview : CP00122G00180

Gene: CP00122G00180 (Carica papaya)

Overview

Gene Identifier: CP00122G00180
Transcript Identifier: CP00122G00180.1
Gene Type: Coding gene
Location: supercontig_122 : 478902-480389 : negative

Family

Gene family: HOM03M001424
(53 genes in 16 species)
specific family
Subfamily: ORTHO03M007320
(5 genes in 4 species)
specific family

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Descriptions

Description (AnnoMine): phosphogluconate dehydrogenase, decarboxylating

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_122.18

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	Genome Project	metabolic process
GO:0055114	IEA	Genome Project	oxidation-reduction process
GO:0006098	IEA	Genome Project	pentose-phosphate shunt
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT5G41670
GO:0009750	ISO	PLAZA Integrative Orthology	response to fructose	AT5G41670
GO:0009749	ISO	PLAZA Integrative Orthology	response to glucose	AT5G41670
GO:0009744	ISO	PLAZA Integrative Orthology	response to sucrose	AT5G41670
GO:0009651	ISO	PLAZA Integrative Orthology	response to salt stress	AT1G64190

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004616	IEA	Genome Project	phosphogluconate dehydrogenase (decarboxylating) activity
GO:0003824	IEA	Genome Project	catalytic activity
GO:0005488	IEA	Genome Project	binding
GO:0050661	IEA	Genome Project	NADP binding
GO:0050662	IEA	Genome Project	coenzyme binding
GO:0016491	IEA	Genome Project	oxidoreductase activity
GO:0016616	IEA	InterPro	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT5G41670
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G41670 AT1G64190
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT5G41670 AT1G64190
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT5G41670 AT1G64190
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT5G41670
GO:0009536	ISO	PLAZA Integrative Orthology	plastid	AT1G64190
GO:0016020	ISO	PLAZA Integrative Orthology	membrane	AT1G64190

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013328	Dehydrogenase, multihelical
IPR006115	6-phosphogluconate dehydrogenase, NADP-binding
IPR008927	6-phosphogluconate dehydrogenase, C-terminal-like
IPR012284	Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension
IPR006114	6-phosphogluconate dehydrogenase, C-terminal
IPR016040	NAD(P)-binding domain
IPR006113	6-phosphogluconate dehydrogenase, decarboxylating

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.