PLAZA 3.0 Monocots gene overview : CP00116G00460

Gene: CP00116G00460 (Carica papaya)

Overview

Gene Identifier: CP00116G00460
Transcript Identifier: CP00116G00460.1
Gene Type: Coding gene
Location: supercontig_116 : 470819-487336 : positive

Family

Gene family: HOM03M001163
(63 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine): Valine--tRNA ligase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_116.46

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006438	IEA	Genome Project	valyl-tRNA aminoacylation
GO:0006418	IEA	Genome Project	tRNA aminoacylation for protein translation
GO:0006412	IEA	Genome Project	translation

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0004832	IEA	Genome Project	valine-tRNA ligase activity
GO:0000166	IEA	Genome Project	nucleotide binding
GO:0004812	IEA	Genome Project	aminoacyl-tRNA ligase activity
GO:0002161	IEA	InterPro	aminoacyl-tRNA editing activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	Genome Project	cytoplasm

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR010978	tRNA-binding arm
IPR002303	Valine-tRNA ligase
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR013155	Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
IPR002300	Aminoacyl-tRNA synthetase, class Ia
IPR019499	Valyl-tRNA synthetase, tRNA-binding arm
IPR009080	Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR015413	Methionyl/Leucyl tRNA synthetase
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.