Gene: CP00086G00740 (Carica papaya)

Overview top

Gene Identifier
CP00086G00740
Transcript Identifier
CP00086G00740.1
Gene Type
Coding gene
Location
supercontig_86 : 967299-969560 : negative

Family

Gene family
HOM03M002709
(32 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Transcription elongation factor A protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_86.74

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0006357IEAGenome Projectregulation of transcription from RNA polymerase II promoter
GO:0006351IEAGenome Projecttranscription, DNA-templated
GO:0006354IEAGenome ProjectDNA-dependent transcription, elongation
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT2G38560
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT2G38560
GO:0034243ISOPLAZA Integrative Orthologyregulation of transcription elongation from RNA polymerase II promoterAT2G38560
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT2G38560
GO:0009845ISOPLAZA Integrative Orthologyseed germinationAT2G38560
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M002709

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003746IEAGenome Projecttranslation elongation factor activity
GO:0003676IEAGenome Projectnucleic acid binding
GO:0005515IEAGenome Projectprotein binding
GO:0008270IEAGenome Projectzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017923Transcription factor IIS, N-terminal
IPR001222Zinc finger, TFIIS-type
IPR003618Transcription elongation factor S-II, central domain
IPR006289Transcription elongation factor, TFIIS
IPR017890Transcription elongation factor S-IIM

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.