Gene: CP00081G01710 (Carica papaya)

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Gene Identifier
CP00081G01710
Transcript Identifier
CP00081G01710.1
Gene Type
Coding gene
Location
supercontig_81 : 861066-862764 : negative

Family

Gene family
HOM03M000164
(290 genes in 16 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Actin, cytoplasmic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_81.171

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT1G49240 AT3G18780
GO:0048768ISOPLAZA Integrative Orthologyroot hair cell tip growthAT1G49240 AT3G18780
GO:0009735ISOPLAZA Integrative Orthologyresponse to cytokininAT1G49240 AT3G18780
GO:0010218ISOPLAZA Integrative Orthologyresponse to far red lightAT1G49240 AT3G18780
GO:0009644ISOPLAZA Integrative Orthologyresponse to high light intensityAT1G49240 AT3G18780
GO:0010114ISOPLAZA Integrative Orthologyresponse to red lightAT1G49240 AT3G18780
GO:0007010ISOPLAZA Integrative Orthologycytoskeleton organizationAT2G37620 AT3G53750
GO:0048589ISOPLAZA Integrative Orthologydevelopmental growthAT2G37620
GO:0048767ISOPLAZA Integrative Orthologyroot hair elongationAT2G37620 AT3G18780 AT3G53750
GO:0030036ISOPLAZA Integrative Orthologyactin cytoskeleton organizationAT3G12110
GO:0010053ISOPLAZA Integrative Orthologyroot epidermal cell differentiationAT3G18780
GO:0006996IEAPLAZA Homologyorganelle organizationHOM03M000164

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0005515IEAGenome Projectprotein binding
GO:0005507ISOPLAZA Integrative Orthologycopper ion bindingAT1G49240 AT3G18780
GO:0005200ISOPLAZA Integrative Orthologystructural constituent of cytoskeletonAT1G49240 AT3G18780

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G49240
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT1G49240 AT3G18780
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G49240 AT2G37620 AT3G12110 AT3G18780 AT3G53750
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT1G49240 AT3G12110 AT3G18780
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT1G49240 AT3G12110 AT3G18780
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G49240 AT2G37620 AT3G18780 AT3G53750
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT1G49240 AT2G37620 AT3G12110 AT3G18780 AT3G53750
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT1G49240 AT3G18780
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G49240 AT3G18780
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G49240 AT2G37620 AT3G18780 AT3G53750
GO:0005856ISOPLAZA Integrative OrthologycytoskeletonAT2G37620 AT3G53750
GO:0005618ISOPLAZA Integrative Orthologycell wallAT2G37620 AT3G53750
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT2G37620 AT3G53750
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G12110
GO:0044446IEAPLAZA Homologyintracellular organelle partHOM03M000164

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004000Actin-related protein
IPR004001Actin, conserved site
IPR020902Actin/actin-like conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.