PLAZA 3.0 Monocots gene overview : CP00074G00700

Gene: CP00074G00700 (Carica papaya)

Overview

Gene Identifier: CP00074G00700
Transcript Identifier: CP00074G00700.1
Gene Type: Coding gene
Location: supercontig_74 : 688014-691281 : negative

Family

Gene family: HOM03M000582
(115 genes in 16 species)
specific family
Subfamily: ORTHO03M000340
(16 genes in 10 species)
specific family

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Descriptions

Description (AnnoMine): Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_74.70

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	Genome Project	metabolic process
GO:0005975	IEA	Genome Project	carbohydrate metabolic process
GO:0006012	IEA	Genome Project	galactose metabolic process
GO:0044237	IEA	Genome Project	cellular metabolic process
GO:0046369	ISO	PLAZA Integrative Orthology	galactose biosynthetic process	AT1G12780
GO:0009555	ISO	PLAZA Integrative Orthology	pollen development	AT1G63180

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016857	IEA	Genome Project	racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0003824	IEA	Genome Project	catalytic activity
GO:0005488	IEA	Genome Project	binding
GO:0003978	IEA	Genome Project	UDP-glucose 4-epimerase activity
GO:0050662	IEA	Genome Project	coenzyme binding
GO:0046983	ISO	PLAZA Integrative Orthology	protein dimerization activity	AT1G12780 AT1G63180
GO:0050373	ISO	PLAZA Integrative Orthology	UDP-arabinose 4-epimerase activity	AT1G12780 AT1G63180
GO:0016854	IEA	PLAZA Homology	racemase and epimerase activity	HOM03M000582

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G12780
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT1G12780

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR005886	UDP-glucose 4-epimerase GalE
IPR001509	NAD-dependent epimerase/dehydratase
IPR016040	NAD(P)-binding domain
IPR025308	UDP-glucose 4-epimerase C-terminal domain

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.