Gene: CP00057G00720 (Carica papaya)

Overview top

Gene Identifier
CP00057G00720
Transcript Identifier
CP00057G00720.1
Gene Type
Coding gene
Location
supercontig_57 : 1154926-1167485 : positive

Family

Gene family
HOM03M000334
(174 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine)
Endoribonuclease Dicer homolog 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_57.72

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006396IEAGenome ProjectRNA processing
GO:0035196ISOPLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNAOS03G02970 AT1G01040
GO:0007275ISOPLAZA Integrative Orthologymulticellular organismal developmentOS03G02970
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT1G01040
GO:0009908ISOPLAZA Integrative Orthologyflower developmentAT1G01040
GO:0009880ISOPLAZA Integrative Orthologyembryonic pattern specificationAT1G01040
GO:2000034ISOPLAZA Integrative Orthologyregulation of seed maturationAT1G01040
GO:0010599ISOPLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interferenceAT1G01040
GO:0030422ISOPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT1G01040
GO:0009616ISOPLAZA Integrative Orthologyvirus induced gene silencingAT1G01040
GO:0010267ISOPLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interferenceAT1G01040
GO:0031053ISOPLAZA Integrative Orthologyprimary miRNA processingAT1G01040
GO:0035279ISOPLAZA Integrative OrthologymRNA cleavage involved in gene silencing by miRNAAT1G01040
GO:0000910ISOPLAZA Integrative OrthologycytokinesisAT1G01040
GO:0010098ISOPLAZA Integrative Orthologysuspensor developmentAT1G01040

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEAGenome ProjectRNA binding
GO:0005524IEAGenome ProjectATP binding
GO:0004525IEAGenome Projectribonuclease III activity
GO:0004386IEAGenome Projecthelicase activity
GO:0003725IEAGenome Projectdouble-stranded RNA binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0005515IEAInterProprotein binding
GO:0016891IEAInterProendoribonuclease activity, producing 5'-phosphomonoesters
GO:0016893IEAPLAZA Homologyendonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoestersHOM03M000334
GO:0004521IEAPLAZA Homologyendoribonuclease activityHOM03M000334

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0010445ISOPLAZA Integrative Orthologynuclear dicing bodyAT1G01040
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G01040

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000999Ribonuclease III domain
IPR014720Double-stranded RNA-binding domain
IPR001650Helicase, C-terminal
IPR003100Argonaute/Dicer protein, PAZ domain
IPR005034Dicer dimerisation domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR014001Helicase, superfamily 1/2, ATP-binding domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.