Gene: CP00050G01390 (Carica papaya)

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Gene Identifier
CP00050G01390
Transcript Identifier
CP00050G01390.1
Gene Type
Coding gene
Location
supercontig_50 : 1291943-1303520 : positive

Family

Gene family
HOM03M001792
(44 genes in 16 species)
specific family
Subfamily
ORTHO03M007815
(5 genes in 5 species)
specific family

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Descriptions

Description (AnnoMine)
protein MutS
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_50.139

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006298IEAGenome Projectmismatch repair
GO:0006290ISOPLAZA Integrative Orthologypyrimidine dimer repairAT4G02070

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0030983IEAGenome Projectmismatched DNA binding
GO:0003684ISOPLAZA Integrative Orthologydamaged DNA bindingAT4G02070
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G02070

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015536DNA mismatch repair protein MutS-homologue MSH6
IPR007696DNA mismatch repair protein MutS, core
IPR007860DNA mismatch repair protein MutS, connector domain
IPR000432DNA mismatch repair protein MutS, C-terminal
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR007861DNA mismatch repair protein MutS, clamp
IPR007695DNA mismatch repair protein MutS-like, N-terminal
IPR016151DNA mismatch repair protein MutS, N-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.