Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene: CP00048G00980 (Carica papaya)
Overview 
- Gene Identifier
- CP00048G00980
- Transcript Identifier
- CP00048G00980.1
- Gene Type
- Coding gene
- Location
- supercontig_48 : 560881-564781 : positive
Family
- Gene family
Descriptions
- Description (AnnoMine)
-
actin-capping protein subunit alpha-2
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| pid | evm.TU.supercontig_48.98 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0030036 | IEA | Genome Project | actin cytoskeleton organization | |
| GO:0007015 | ISO | PLAZA Integrative Orthology | actin filament organization | AT3G05520 |
| GO:0051693 | ISO | PLAZA Integrative Orthology | actin filament capping | AT3G05520 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003779 | IEA | Genome Project | actin binding |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0008290 | IEA | Genome Project | F-actin capping protein complex | |
| GO:0071203 | IEA | InterPro | WASH complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G05520 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.