Gene: CP00043G01420 (Carica papaya)

Overview top

Gene Identifier
CP00043G01420
Transcript Identifier
CP00043G01420.1
Gene Type
Coding gene
Location
supercontig_43 : 1862804-1866978 : negative

Family

Gene family
HOM03M000679
(102 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
sigma factor SigA
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_43.142

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0006352IEAGenome ProjectDNA-dependent transcription, initiation
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000679

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0016987IEAGenome Projectsigma factor activity
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0000990IEAPLAZA Homologycore RNA polymerase binding transcription factor activityHOM03M000679
GO:0000996IEAPLAZA Homologycore DNA-dependent RNA polymerase binding promoter specificity activityHOM03M000679

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000943RNA polymerase sigma-70
IPR013324RNA polymerase sigma factor, region 3/4
IPR011991Winged helix-turn-helix DNA-binding domain
IPR007630RNA polymerase sigma-70 region 4

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBOrphans