Gene: CP00031G00490 (Carica papaya)

Overview top

Gene Identifier
CP00031G00490
Transcript Identifier
CP00031G00490.1
Gene Type
Coding gene
Location
supercontig_31 : 941857-967481 : negative

Family

Gene family
HOM03M000534
(122 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Probable Werner syndrome ATP-dependent helicase homolog 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_31.49

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAGenome ProjectDNA repair
GO:0006260IEAGenome ProjectDNA replication
GO:0006310IEAGenome ProjectDNA recombination
GO:0070417ISOPLAZA Integrative Orthologycellular response to coldAT1G10930 AT1G60930
GO:0071215ISOPLAZA Integrative Orthologycellular response to abscisic acid stimulusAT1G10930
GO:0000723ISOPLAZA Integrative Orthologytelomere maintenanceAT1G10930
GO:0000724ISOPLAZA Integrative Orthologydouble-strand break repair via homologous recombinationAT1G10930
GO:0006974ISOPLAZA Integrative Orthologycellular response to DNA damage stimulusAT1G10930
GO:0051276ISOPLAZA Integrative Orthologychromosome organizationAT1G10930

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0043140IEAGenome ProjectATP-dependent 3'-5' DNA helicase activity
GO:0004386IEAGenome Projecthelicase activity
GO:0003676IEAGenome Projectnucleic acid binding
GO:0008026IEAGenome ProjectATP-dependent helicase activity
GO:0043138ISOPLAZA Integrative Orthology3'-5' DNA helicase activityAT1G10930
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03M000534

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT1G10930

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004589DNA helicase, ATP-dependent, RecQ type
IPR001650Helicase, C-terminal
IPR018982RQC domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.