Gene: CP00027G00020 (Carica papaya)

Overview top

Gene Identifier
CP00027G00020
Transcript Identifier
CP00027G00020.1
Gene Type
Coding gene
Location
supercontig_27 : 5139-23112 : positive

Family

Gene family
HOM03M001489
(52 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Homeobox protein Hox
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_27.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0006351IEAInterProtranscription, DNA-templated
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT1G28420
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M001489

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G28420

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001356Homeobox domain
IPR009057Homeodomain-like
IPR018501DDT domain superfamily
IPR007759DNA-directed RNA polymerase delta subunit/Asxl
IPR004022DDT domain
IPR018500DDT domain, subgroup

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBHB