Gene: CP00017G01000 (Carica papaya)

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Gene Identifier
CP00017G01000
Transcript Identifier
CP00017G01000.1
Gene Type
Coding gene
Location
supercontig_17 : 1440732-1455962 : negative

Family

Gene family
HOM03M001131
(64 genes in 14 species)
specific family

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Descriptions

Description (AnnoMine)
Phytochrome A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_17.100

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007600IEAGenome Projectsensory perception
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0009585IEAGenome Projectred, far-red light phototransduction
GO:0017006IEAGenome Projectprotein-tetrapyrrole linkage
GO:0000160IEAGenome Projectphosphorelay signal transduction system
GO:0018106IEAGenome Projectpeptidyl-histidine phosphorylation
GO:0007165IEAGenome Projectsignal transduction
GO:0018298IEAGenome Projectprotein-chromophore linkage
GO:0009584IEAInterProdetection of visible light
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M001131

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008020IEAGenome ProjectG-protein coupled photoreceptor activity
GO:0005524IEAGenome ProjectATP binding
GO:0004673IEAGenome Projectprotein histidine kinase activity
GO:0004871IEAGenome Projectsignal transducer activity
GO:0009881IEAGenome Projectphotoreceptor activity
GO:0004872IEAGenome Projectreceptor activity
GO:0042803IEAGenome Projectprotein homodimerization activity
GO:0000155IEAGenome Projectphosphorelay sensor kinase activity
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013516Phytochrome chromophore binding site
IPR000014PAS domain
IPR001294Phytochrome
IPR000700PAS-associated, C-terminal
IPR013515Phytochrome, central region
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR003661Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
IPR003018GAF domain
IPR013767PAS fold
IPR013654PAS fold-2
IPR005467Signal transduction histidine kinase, core
IPR016132Phytochrome chromophore attachment domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.