Gene: CP00016G00840 (Carica papaya)

Overview top

Gene Identifier
CP00016G00840
Transcript Identifier
CP00016G00840.1
Gene Type
Coding gene
Location
supercontig_16 : 1356838-1358747 : positive

Family

Gene family
HOM03M000306
(182 genes in 16 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Prolyl 4-hydroxylase subunit alpha-1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_16.84

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0080147ISOPLAZA Integrative Orthologyroot hair cell developmentAT3G06300
GO:0018401ISOPLAZA Integrative Orthologypeptidyl-proline hydroxylation to 4-hydroxy-L-prolineAT3G06300

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016705IEAGenome Projectoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506IEAGenome Projectiron ion binding
GO:0031418IEAGenome ProjectL-ascorbic acid binding
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0016706IEAInterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0004656ISOPLAZA Integrative Orthologyprocollagen-proline 4-dioxygenase activityAT3G06300
GO:0031406IEAPLAZA Homologycarboxylic acid bindingHOM03M000306
GO:0043177IEAPLAZA Homologyorganic acid bindingHOM03M000306
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03M000306
GO:0019842IEAPLAZA Homologyvitamin bindingHOM03M000306
GO:0030246IEAPLAZA Homologycarbohydrate bindingHOM03M000306
GO:0048029IEAPLAZA Homologymonosaccharide bindingHOM03M000306

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT5G18900
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT5G18900 AT3G06300
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G18900
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G18900
GO:0005802ISOPLAZA Integrative Orthologytrans-Golgi networkAT3G06300
GO:0005768ISOPLAZA Integrative OrthologyendosomeAT3G06300

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003582ShKT domain
IPR006620Prolyl 4-hydroxylase, alpha subunit
IPR005123Oxoglutarate/iron-dependent dioxygenase

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.