PLAZA 3.0 Monocots gene overview : CP00012G01880

Gene: CP00012G01880 (Carica papaya)

Overview

Gene Identifier: CP00012G01880
Transcript Identifier: CP00012G01880.1
Gene Type: Coding gene
Location: supercontig_12 : 1688802-1693633 : positive

Family

Gene family: HOM03M000144
(329 genes in 16 species)
specific family
Subfamily: ORTHO03M000009
(87 genes in 14 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

Description (AnnoMine): Oligomycin resistance ATP-dependent permease YOR1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_12.188

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006810	IEA	Genome Project	transport
GO:0055085	IEA	InterPro	transmembrane transport
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT2G47800
GO:0010118	ISO	PLAZA Integrative Orthology	stomatal movement	AT2G47800
GO:0009624	ISO	PLAZA Integrative Orthology	response to nematode	AT2G47800
GO:0009611	ISO	PLAZA Integrative Orthology	response to wounding	AT2G47800
GO:0044765	IEA	PLAZA Homology	single-organism transport	HOM03M000144

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0000166	IEA	Genome Project	nucleotide binding
GO:0042626	IEA	Genome Project	ATPase activity, coupled to transmembrane movement of substances
GO:0017111	IEA	Genome Project	nucleoside-triphosphatase activity
GO:0016887	IEA	Genome Project	ATPase activity
GO:0008517	ISO	PLAZA Integrative Orthology	folic acid transporter activity	AT2G47800
GO:0005215	IEA	PLAZA Homology	transporter activity	HOM03M000144
GO:0032555	IEA	PLAZA Homology	purine ribonucleotide binding	HOM03M000144
GO:0016817	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides	HOM03M000144
GO:0042623	IEA	PLAZA Homology	ATPase activity, coupled	HOM03M000144
GO:0035639	IEA	PLAZA Homology	purine ribonucleoside triphosphate binding	HOM03M000144
GO:0022804	IEA	PLAZA Homology	active transmembrane transporter activity	HOM03M000144
GO:0016818	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	HOM03M000144
GO:0032559	IEA	PLAZA Homology	adenyl ribonucleotide binding	HOM03M000144
GO:0016462	IEA	PLAZA Homology	pyrophosphatase activity	HOM03M000144
GO:0030554	IEA	PLAZA Homology	adenyl nucleotide binding	HOM03M000144
GO:0001882	IEA	PLAZA Homology	nucleoside binding	HOM03M000144
GO:0016820	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	HOM03M000144
GO:0015399	IEA	PLAZA Homology	primary active transmembrane transporter activity	HOM03M000144
GO:0015405	IEA	PLAZA Homology	P-P-bond-hydrolysis-driven transmembrane transporter activity	HOM03M000144
GO:0022857	IEA	PLAZA Homology	transmembrane transporter activity	HOM03M000144
GO:0032549	IEA	PLAZA Homology	ribonucleoside binding	HOM03M000144
GO:0001883	IEA	PLAZA Homology	purine nucleoside binding	HOM03M000144
GO:0032550	IEA	PLAZA Homology	purine ribonucleoside binding	HOM03M000144
GO:0043492	IEA	PLAZA Homology	ATPase activity, coupled to movement of substances	HOM03M000144

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016021	IEA	Genome Project	integral to membrane
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT2G47800
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT2G47800
GO:0000325	ISO	PLAZA Integrative Orthology	plant-type vacuole	AT2G47800 AT3G21250
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT2G47800 AT3G21250
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT2G47800
GO:0005794	ISO	PLAZA Integrative Orthology	Golgi apparatus	AT2G47800
GO:0031224	IEA	PLAZA Homology	intrinsic to membrane	HOM03M000144
GO:0044425	IEA	PLAZA Homology	membrane part	HOM03M000144

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003439	ABC transporter-like
IPR001140	ABC transporter, transmembrane domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter, conserved site
IPR011527	ABC transporter type 1, transmembrane domain
IPR003593	AAA+ ATPase domain

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.