Gene: CP00010G01240 (Carica papaya)

Overview top

Gene Identifier
CP00010G01240
Transcript Identifier
CP00010G01240.1
Gene Type
Coding gene
Location
supercontig_10 : 1962666-1971963 : positive

Family

Gene family
HOM03M000684
(100 genes in 14 species)
specific family

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Descriptions

Description (AnnoMine)
Topless-related protein 4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_10.124

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAGenome Projectproteolysis
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010072ISOPLAZA Integrative Orthologyprimary shoot apical meristem specificationAT1G80490 AT1G15750
GO:0009867ISOPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT1G15750
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT1G15750
GO:0010051ISOPLAZA Integrative Orthologyxylem and phloem pattern formationAT1G15750
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT1G15750
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000684

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004252IEAGenome Projectserine-type endopeptidase activity
GO:0005515IEAInterProprotein binding
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT1G15750

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G80490 AT1G15750
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G15750

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017986WD40-repeat-containing domain
IPR006594LisH dimerisation motif
IPR019775WD40 repeat, conserved site
IPR001680WD40 repeat
IPR006595CTLH, C-terminal LisH motif
IPR015943WD40/YVTN repeat-like-containing domain
IPR027728Topless family

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.