PLAZA 3.0 Monocots gene overview : CP00009G01980

Gene: CP00009G01980 (Carica papaya)

Overview

Gene Identifier: CP00009G01980
Transcript Identifier: CP00009G01980.1
Gene Type: Coding gene
Location: supercontig_9 : 1355516-1356600 : positive

Family

Gene family: HOM03M000095
(494 genes in 16 species)
specific family
Subfamily: ORTHO03M025823
(2 genes in 2 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Copper transport protein

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_9.198

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0030001	IEA	Genome Project	metal ion transport
GO:0044765	IEA	PLAZA Homology	single-organism transport	HOM03M000095
GO:0044699	IEA	PLAZA Homology	single-organism process	HOM03M000095
GO:0006810	IEA	PLAZA Homology	transport	HOM03M000095
GO:0051234	IEA	PLAZA Homology	establishment of localization	HOM03M000095
GO:0006812	IEA	PLAZA Homology	cation transport	HOM03M000095
GO:0006811	IEA	PLAZA Homology	ion transport	HOM03M000095
GO:0051179	IEA	PLAZA Homology	localization	HOM03M000095

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0046872	IEA	Genome Project	metal ion binding
GO:0043169	IEA	PLAZA Homology	cation binding	HOM03M000095
GO:0043167	IEA	PLAZA Homology	ion binding	HOM03M000095

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006121	Heavy metal-associated domain, HMA

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.