PLAZA 3.0 Monocots gene overview : CP00007G00980

Gene: CP00007G00980 (Carica papaya)

Overview

Gene Identifier: CP00007G00980
Transcript Identifier: CP00007G00980.1
Gene Type: Coding gene
Location: supercontig_7 : 897366-902175 : positive

Family

Gene family: HOM03M000097
(485 genes in 14 species)
specific family

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Descriptions

Description (AnnoMine): Cellulose synthase A catalytic subunit

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_7.98

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0030244	IEA	Genome Project	cellulose biosynthetic process
GO:0009834	ISO	PLAZA Integrative Orthology	secondary cell wall biogenesis	AT4G18780
GO:0006970	ISO	PLAZA Integrative Orthology	response to osmotic stress	AT4G18780
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT4G18780
GO:0009863	ISO	PLAZA Integrative Orthology	salicylic acid mediated signaling pathway	AT4G18780
GO:0009867	ISO	PLAZA Integrative Orthology	jasmonic acid mediated signaling pathway	AT4G18780
GO:0009873	ISO	PLAZA Integrative Orthology	ethylene mediated signaling pathway	AT4G18780
GO:0010116	ISO	PLAZA Integrative Orthology	positive regulation of abscisic acid biosynthetic process	AT4G18780
GO:0042742	ISO	PLAZA Integrative Orthology	defense response to bacterium	AT4G18780
GO:0050832	ISO	PLAZA Integrative Orthology	defense response to fungus	AT4G18780
GO:0052386	ISO	PLAZA Integrative Orthology	cell wall thickening	AT4G18780
GO:0051274	IEA	PLAZA Homology	beta-glucan biosynthetic process	HOM03M000097
GO:0051273	IEA	PLAZA Homology	beta-glucan metabolic process	HOM03M000097
GO:0044264	IEA	PLAZA Homology	cellular polysaccharide metabolic process	HOM03M000097
GO:1901576	IEA	PLAZA Homology	organic substance biosynthetic process	HOM03M000097
GO:0044262	IEA	PLAZA Homology	cellular carbohydrate metabolic process	HOM03M000097
GO:0044260	IEA	PLAZA Homology	cellular macromolecule metabolic process	HOM03M000097
GO:0044763	IEA	PLAZA Homology	single-organism cellular process	HOM03M000097
GO:0006073	IEA	PLAZA Homology	cellular glucan metabolic process	HOM03M000097
GO:0016051	IEA	PLAZA Homology	carbohydrate biosynthetic process	HOM03M000097
GO:0044710	IEA	PLAZA Homology	single-organism metabolic process	HOM03M000097
GO:0044711	IEA	PLAZA Homology	single-organism biosynthetic process	HOM03M000097
GO:0034645	IEA	PLAZA Homology	cellular macromolecule biosynthetic process	HOM03M000097
GO:0033692	IEA	PLAZA Homology	cellular polysaccharide biosynthetic process	HOM03M000097
GO:0043170	IEA	PLAZA Homology	macromolecule metabolic process	HOM03M000097
GO:0005976	IEA	PLAZA Homology	polysaccharide metabolic process	HOM03M000097
GO:0009058	IEA	PLAZA Homology	biosynthetic process	HOM03M000097
GO:0005975	IEA	PLAZA Homology	carbohydrate metabolic process	HOM03M000097
GO:0009059	IEA	PLAZA Homology	macromolecule biosynthetic process	HOM03M000097
GO:0044699	IEA	PLAZA Homology	single-organism process	HOM03M000097
GO:0044723	IEA	PLAZA Homology	single-organism carbohydrate metabolic process	HOM03M000097
GO:0034637	IEA	PLAZA Homology	cellular carbohydrate biosynthetic process	HOM03M000097
GO:0009250	IEA	PLAZA Homology	glucan biosynthetic process	HOM03M000097
GO:0044249	IEA	PLAZA Homology	cellular biosynthetic process	HOM03M000097
GO:0030243	IEA	PLAZA Homology	cellulose metabolic process	HOM03M000097
GO:0044042	IEA	PLAZA Homology	glucan metabolic process	HOM03M000097
GO:0000271	IEA	PLAZA Homology	polysaccharide biosynthetic process	HOM03M000097

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016760	IEA	Genome Project	cellulose synthase (UDP-forming) activity
GO:0016759	ISO	PLAZA Integrative Orthology	cellulose synthase activity	AT4G18780
GO:0016758	IEA	PLAZA Homology	transferase activity, transferring hexosyl groups	HOM03M000097
GO:0016757	IEA	PLAZA Homology	transferase activity, transferring glycosyl groups	HOM03M000097
GO:0008194	IEA	PLAZA Homology	UDP-glycosyltransferase activity	HOM03M000097
GO:0035251	IEA	PLAZA Homology	UDP-glucosyltransferase activity	HOM03M000097
GO:0046527	IEA	PLAZA Homology	glucosyltransferase activity	HOM03M000097
GO:0016740	IEA	PLAZA Homology	transferase activity	HOM03M000097

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	IEA	Genome Project	membrane
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT4G18780
GO:0005618	ISO	PLAZA Integrative Orthology	cell wall	AT4G18780

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR005150	Cellulose synthase
IPR027934	Cellulose synthase, RING-type zinc finger

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.