PLAZA 3.0 Monocots gene overview : CP00006G03000

Gene: CP00006G03000 (Carica papaya)

Overview

Gene Identifier: CP00006G03000
Transcript Identifier: CP00006G03000.1
Gene Type: Coding gene
Location: supercontig_6 : 2259101-2262098 : negative

Family

Gene family: HOM03M000031
(1041 genes in 16 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

Description (AnnoMine): Aspartic proteinase-like protein 1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_6.301

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006508	IEA	Genome Project	proteolysis
GO:0008152	IEA	PLAZA Homology	metabolic process	HOM03M000031
GO:0071704	IEA	PLAZA Homology	organic substance metabolic process	HOM03M000031
GO:0043170	IEA	PLAZA Homology	macromolecule metabolic process	HOM03M000031
GO:0019538	IEA	PLAZA Homology	protein metabolic process	HOM03M000031
GO:0044238	IEA	PLAZA Homology	primary metabolic process	HOM03M000031

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004190	IEA	Genome Project	aspartic-type endopeptidase activity
GO:0070011	IEA	PLAZA Homology	peptidase activity, acting on L-amino acid peptides	HOM03M000031
GO:0004175	IEA	PLAZA Homology	endopeptidase activity	HOM03M000031
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03M000031
GO:0070001	IEA	PLAZA Homology	aspartic-type peptidase activity	HOM03M000031
GO:0008233	IEA	PLAZA Homology	peptidase activity	HOM03M000031
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03M000031

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001969	Aspartic peptidase, active site
IPR021109	Aspartic peptidase domain
IPR001461	Aspartic peptidase

No MapMan annotations defined for this gene.

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network