PLAZA 3.0 Monocots gene overview : CP00006G02710

Gene: CP00006G02710 (Carica papaya)

Overview

Gene Identifier: CP00006G02710
Transcript Identifier: CP00006G02710.1
Gene Type: Coding gene
Location: supercontig_6 : 2131358-2137841 : positive

Family

Gene family: HOM03M000267
(200 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): Osmosensing histidine protein kinase SLN1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_6.272

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0018106	IEA	Genome Project	peptidyl-histidine phosphorylation
GO:0016310	IEA	Genome Project	phosphorylation
GO:0007165	IEA	Genome Project	signal transduction
GO:0006355	IEA	Genome Project	regulation of transcription, DNA-dependent
GO:0000160	IEA	Genome Project	phosphorelay signal transduction system
GO:0006970	ISO	PLAZA Integrative Orthology	response to osmotic stress	AT2G17820
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT2G17820
GO:0010431	ISO	PLAZA Integrative Orthology	seed maturation	AT2G17820
GO:0010375	ISO	PLAZA Integrative Orthology	stomatal complex patterning	AT2G17820
GO:2001141	IEA	PLAZA Homology	regulation of RNA biosynthetic process	HOM03M000267

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0004673	IEA	Genome Project	protein histidine kinase activity
GO:0000155	IEA	Genome Project	phosphorelay sensor kinase activity
GO:0004871	IEA	Genome Project	signal transducer activity
GO:0000156	IEA	Genome Project	phosphorelay response regulator activity
GO:0016772	IEA	Genome Project	transferase activity, transferring phosphorus-containing groups
GO:0005034	ISO	PLAZA Integrative Orthology	osmosensor activity	AT2G17820
GO:0009927	ISO	PLAZA Integrative Orthology	histidine phosphotransfer kinase activity	AT2G17820
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT2G17820
GO:0060089	IEA	PLAZA Homology	molecular transducer activity	HOM03M000267
GO:0016775	IEA	PLAZA Homology	phosphotransferase activity, nitrogenous group as acceptor	HOM03M000267
GO:0038023	IEA	PLAZA Homology	signaling receptor activity	HOM03M000267
GO:0004872	IEA	PLAZA Homology	receptor activity	HOM03M000267

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	IEA	Genome Project	membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003594	Histidine kinase-like ATPase, ATP-binding domain
IPR001789	Signal transduction response regulator, receiver domain
IPR011006	CheY-like superfamily
IPR004358	Signal transduction histidine kinase-related protein, C-terminal
IPR009082	Signal transduction histidine kinase, homodimeric domain
IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
IPR005467	Signal transduction histidine kinase, core

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.

Database	Type
PlnTFDB	Orphans