PLAZA 3.0 Monocots gene overview : CP00006G00940

Gene: CP00006G00940 (Carica papaya)

Overview

Gene Identifier: CP00006G00940
Transcript Identifier: CP00006G00940.1
Gene Type: Coding gene
Location: supercontig_6 : 709821-719143 : positive

Family

Gene family: HOM03M000315
(179 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_6.95

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Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	Genome Project	metabolic process
GO:0030001	IEA	Genome Project	metal ion transport
GO:0006754	IEA	Genome Project	ATP biosynthetic process
GO:0006812	IEA	InterPro	cation transport
GO:0006878	ISO	PLAZA Integrative Orthology	cellular copper ion homeostasis	AT4G37270
GO:0009642	ISO	PLAZA Integrative Orthology	response to light intensity	AT4G37270
GO:0006816	ISO	PLAZA Integrative Orthology	calcium ion transport	AT4G37270
GO:0009636	ISO	PLAZA Integrative Orthology	response to toxic substance	AT4G37270
GO:0055069	ISO	PLAZA Integrative Orthology	zinc ion homeostasis	AT4G37270

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0046873	IEA	Genome Project	metal ion transmembrane transporter activity
GO:0015662	IEA	Genome Project	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO:0005524	IEA	Genome Project	ATP binding
GO:0003824	IEA	Genome Project	catalytic activity
GO:0046872	IEA	Genome Project	metal ion binding
GO:0016820	IEA	Genome Project	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0016818	IEA	Genome Project	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019829	IEA	InterPro	cation-transporting ATPase activity
GO:0000166	IEA	InterPro	nucleotide binding
GO:0016887	ISO	PLAZA Integrative Orthology	ATPase activity	AT4G37270
GO:0005388	ISO	PLAZA Integrative Orthology	calcium-transporting ATPase activity	AT4G37270
GO:0015434	ISO	PLAZA Integrative Orthology	cadmium-transporting ATPase activity	AT4G37270
GO:0015633	ISO	PLAZA Integrative Orthology	zinc transporting ATPase activity	AT4G37270
GO:0042626	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of substances	HOM03M000315
GO:0042625	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of ions	HOM03M000315
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03M000315
GO:0015399	IEA	PLAZA Homology	primary active transmembrane transporter activity	HOM03M000315
GO:0015405	IEA	PLAZA Homology	P-P-bond-hydrolysis-driven transmembrane transporter activity	HOM03M000315
GO:0043492	IEA	PLAZA Homology	ATPase activity, coupled to movement of substances	HOM03M000315

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	IEA	Genome Project	membrane
GO:0016021	IEA	Genome Project	integral to membrane
GO:0009941	ISO	PLAZA Integrative Orthology	chloroplast envelope	AT4G37270
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT4G37270
GO:0009536	ISO	PLAZA Integrative Orthology	plastid	AT4G37270

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR027256	Cation-transporting P-type ATPase, subfamily IB
IPR023298	P-type ATPase, transmembrane domain
IPR001757	Cation-transporting P-type ATPase
IPR023214	HAD-like domain
IPR018303	P-type ATPase, phosphorylation site
IPR008250	P-type ATPase, A domain
IPR023299	P-type ATPase, cytoplasmic domain N

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.