Gene: CP00005G00050 (Carica papaya)

Overview top

Gene Identifier
CP00005G00050
Transcript Identifier
CP00005G00050.1
Gene Type
Coding gene
Location
supercontig_5 : 20160-25849 : positive

Family

Gene family
HOM03M000871
(81 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Signal recognition particle 54 kDa protein
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_5.5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006614IEAGenome ProjectSRP-dependent cotranslational protein targeting to membrane
GO:0045038ISOPLAZA Integrative Orthologyprotein import into chloroplast thylakoid membraneAT5G03940
GO:0006613IEAPLAZA Homologycotranslational protein targeting to membraneHOM03M000871

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0000166IEAGenome Projectnucleotide binding
GO:0017111IEAGenome Projectnucleoside-triphosphatase activity
GO:0005525IEAGenome ProjectGTP binding
GO:0008312IEAGenome Project7S RNA binding
GO:0003924IEAInterProGTPase activity
GO:0005048ISOPLAZA Integrative Orthologysignal sequence bindingAT5G03940

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0048500IEAGenome Projectsignal recognition particle
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G03940
GO:0080085ISOPLAZA Integrative Orthologysignal recognition particle, chloroplast targetingAT5G03940
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G03940

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000897Signal recognition particle, SRP54 subunit, GTPase domain
IPR004780Signal recognition particle protein Ffh
IPR004125Signal recognition particle, SRP54 subunit, M-domain
IPR013822Signal recognition particle, SRP54 subunit, helical bundle
IPR003593AAA+ ATPase domain
IPR022941Signal recognition particle, SRP54 subunit
IPR027417P-loop containing nucleoside triphosphate hydrolase

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.