Gene: CP00003G01630 (Carica papaya)

Overview top

Gene Identifier
CP00003G01630
Transcript Identifier
CP00003G01630.1
Gene Type
Coding gene
Location
supercontig_3 : 1198491-1199522 : negative

Family

Gene family
HOM03M001976
(41 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
TRANSPARENT TESTA GLABRA 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_3.163

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0043153ISOPLAZA Integrative Orthologyentrainment of circadian clock by photoperiodAT1G12910 AT3G26640
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT1G12910 AT3G26640
GO:0010026ISOPLAZA Integrative Orthologytrichome differentiationAT5G24520
GO:0045165ISOPLAZA Integrative Orthologycell fate commitmentAT5G24520
GO:0032880ISOPLAZA Integrative Orthologyregulation of protein localizationAT5G24520
GO:0009723ISOPLAZA Integrative Orthologyresponse to ethyleneAT5G24520
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT5G24520
GO:0009957ISOPLAZA Integrative Orthologyepidermal cell fate specificationAT5G24520

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0044212ISOPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT1G12910
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT5G24520

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G12910 AT5G24520
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G24520

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001680WD40 repeat
IPR019775WD40 repeat, conserved site
IPR015943WD40/YVTN repeat-like-containing domain
IPR017986WD40-repeat-containing domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.