PLAZA 3.0 Monocots gene overview : CP00001G03330

Gene: CP00001G03330 (Carica papaya)

Overview

Gene Identifier: CP00001G03330
Transcript Identifier: CP00001G03330.1
Gene Type: Coding gene
Location: supercontig_1 : 4569141-4575054 : positive

Family

Gene family: HOM03M000080
(564 genes in 16 species)
specific family
Subfamily: ORTHO03M009701
(4 genes in 4 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Leptomycin B resistance protein pmd1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_1.333

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006810	IEA	Genome Project	transport
GO:0055085	IEA	InterPro	transmembrane transport
GO:0044765	IEA	PLAZA Homology	single-organism transport	HOM03M000080
GO:0051234	IEA	PLAZA Homology	establishment of localization	HOM03M000080
GO:0051179	IEA	PLAZA Homology	localization	HOM03M000080

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0042626	IEA	Genome Project	ATPase activity, coupled to transmembrane movement of substances
GO:0016887	IEA	InterPro	ATPase activity
GO:0005215	IEA	PLAZA Homology	transporter activity	HOM03M000080
GO:0032555	IEA	PLAZA Homology	purine ribonucleotide binding	HOM03M000080
GO:0016817	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides	HOM03M000080
GO:0043168	IEA	PLAZA Homology	anion binding	HOM03M000080
GO:0032553	IEA	PLAZA Homology	ribonucleotide binding	HOM03M000080
GO:0042623	IEA	PLAZA Homology	ATPase activity, coupled	HOM03M000080
GO:0043167	IEA	PLAZA Homology	ion binding	HOM03M000080
GO:0035639	IEA	PLAZA Homology	purine ribonucleoside triphosphate binding	HOM03M000080
GO:0097367	IEA	PLAZA Homology	carbohydrate derivative binding	HOM03M000080
GO:0022804	IEA	PLAZA Homology	active transmembrane transporter activity	HOM03M000080
GO:0016818	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	HOM03M000080
GO:0032559	IEA	PLAZA Homology	adenyl ribonucleotide binding	HOM03M000080
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03M000080
GO:0016462	IEA	PLAZA Homology	pyrophosphatase activity	HOM03M000080
GO:0000166	IEA	PLAZA Homology	nucleotide binding	HOM03M000080
GO:0001882	IEA	PLAZA Homology	nucleoside binding	HOM03M000080
GO:0030554	IEA	PLAZA Homology	adenyl nucleotide binding	HOM03M000080
GO:0016820	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	HOM03M000080
GO:0017076	IEA	PLAZA Homology	purine nucleotide binding	HOM03M000080
GO:0097159	IEA	PLAZA Homology	organic cyclic compound binding	HOM03M000080
GO:0017111	IEA	PLAZA Homology	nucleoside-triphosphatase activity	HOM03M000080
GO:0015399	IEA	PLAZA Homology	primary active transmembrane transporter activity	HOM03M000080
GO:0015405	IEA	PLAZA Homology	P-P-bond-hydrolysis-driven transmembrane transporter activity	HOM03M000080
GO:0022857	IEA	PLAZA Homology	transmembrane transporter activity	HOM03M000080
GO:0036094	IEA	PLAZA Homology	small molecule binding	HOM03M000080
GO:0032549	IEA	PLAZA Homology	ribonucleoside binding	HOM03M000080
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03M000080
GO:1901363	IEA	PLAZA Homology	heterocyclic compound binding	HOM03M000080
GO:0001883	IEA	PLAZA Homology	purine nucleoside binding	HOM03M000080
GO:0032550	IEA	PLAZA Homology	purine ribonucleoside binding	HOM03M000080
GO:0043492	IEA	PLAZA Homology	ATPase activity, coupled to movement of substances	HOM03M000080

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016021	IEA	Genome Project	integral to membrane
GO:0031224	IEA	PLAZA Homology	intrinsic to membrane	HOM03M000080
GO:0016020	IEA	PLAZA Homology	membrane	HOM03M000080
GO:0044425	IEA	PLAZA Homology	membrane part	HOM03M000080

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR011527	ABC transporter type 1, transmembrane domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR003439	ABC transporter-like
IPR001140	ABC transporter, transmembrane domain

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.