Gene: CP00001G01780 (Carica papaya)

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Gene Identifier
CP00001G01780
Transcript Identifier
CP00001G01780.1
Gene Type
Coding gene
Location
supercontig_1 : 2792773-2798177 : positive

Family

Gene family
HOM03M001111
(64 genes in 16 species)
specific family
Subfamily
ORTHO03M004336
(7 genes in 5 species)
specific family

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Descriptions

Description (AnnoMine)
Probable ubiquitin receptor RAD23
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_1.178

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0043161IEAGenome Projectproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0006289IEAGenome Projectnucleotide-excision repair
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT5G38470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003684IEAGenome Projectdamaged DNA binding
GO:0005515IEAInterProprotein binding
GO:0031593ISOPLAZA Integrative Orthologypolyubiquitin bindingAT5G38470 AT3G02540
GO:0070628ISOPLAZA Integrative Orthologyproteasome bindingAT5G38470 AT3G02540
GO:0043130ISOPLAZA Integrative Orthologyubiquitin bindingAT5G38470 AT3G02540

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G38470
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT3G02540

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015940Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
IPR000449Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal
IPR006636Heat shock chaperonin-binding
IPR015360XPC-binding domain
IPR004806UV excision repair protein Rad23
IPR009060UBA-like
IPR000626Ubiquitin domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.