PLAZA 3.0 Monocots gene overview : CP00001G00310

Gene: CP00001G00310 (Carica papaya)

Overview

Gene Identifier: CP00001G00310
Transcript Identifier: CP00001G00310.1
Gene Type: Coding gene
Location: supercontig_1 : 591184-592296 : positive

Family

Gene family: HOM03M000364
(164 genes in 14 species)
specific family
Subfamily: ORTHO03M003361
(8 genes in 8 species)
specific family

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Descriptions

Description (AnnoMine): isopentenyltransferase 8, chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_1.31

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008033	IEA	Genome Project	tRNA processing
GO:0009691	ISO	PLAZA Integrative Orthology	cytokinin biosynthetic process	AT4G24650 AT3G19160 AT1G68460 AT1G25410
GO:0080117	ISO	PLAZA Integrative Orthology	secondary growth	AT1G68460
GO:0034470	IEA	PLAZA Homology	ncRNA processing	HOM03M000364
GO:0006396	IEA	PLAZA Homology	RNA processing	HOM03M000364
GO:0006399	IEA	PLAZA Homology	tRNA metabolic process	HOM03M000364
GO:0034660	IEA	PLAZA Homology	ncRNA metabolic process	HOM03M000364

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0052381	IEA	Genome Project	tRNA dimethylallyltransferase activity
GO:0009824	ISO	PLAZA Integrative Orthology	AMP dimethylallyltransferase activity	AT4G24650 AT1G68460
GO:0052623	ISO	PLAZA Integrative Orthology	ADP dimethylallyltransferase activity	AT4G24650 AT1G68460
GO:0052622	ISO	PLAZA Integrative Orthology	ATP dimethylallyltransferase activity	AT4G24650 AT1G68460

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G24650
GO:0009536	ISO	PLAZA Integrative Orthology	plastid	AT1G68460

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002627	tRNA isopentenyltransferase
IPR027417	P-loop containing nucleoside triphosphate hydrolase

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.