Gene: CP00001G00100 (Carica papaya)

Overview top

Gene Identifier
CP00001G00100
Transcript Identifier
CP00001G00100.1
Gene Type
Coding gene
Location
supercontig_1 : 221181-275752 : positive

Family

Gene family
HOM03M000926
(76 genes in 16 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
DNA ligase 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_1.10

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAGenome ProjectDNA repair
GO:0006260IEAGenome ProjectDNA replication
GO:0006310IEAGenome ProjectDNA recombination
GO:0051103IEAInterProDNA ligation involved in DNA repair

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAGenome ProjectATP binding
GO:0003910IEAGenome ProjectDNA ligase (ATP) activity
GO:0003909IEAInterProDNA ligase activity
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000926
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000926
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000926
GO:0005488IEAPLAZA HomologybindingHOM03M000926

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000977DNA ligase, ATP-dependent
IPR012309DNA ligase, ATP-dependent, C-terminal
IPR012310DNA ligase, ATP-dependent, central
IPR016059DNA ligase, ATP-dependent, conserved site
IPR012340Nucleic acid-binding, OB-fold

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.