Gene: BD4G26420 (Brachypodium distachyon)

Overview top

Gene Identifier
BD4G26420
Transcript Identifier
BD4G26420.1
Gene Type
Coding gene
Location
Bd4 : 31622944-31626242 : positive

Family

Gene family
HOM03M000820
(84 genes in 14 species)
specific family
Subfamily
ORTHO03M000154
(24 genes in 10 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Probable rhamnogalacturonate lyase B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameBradi4g26420
RNAnameBradi4g26420.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAPLAZA Homologycarbohydrate metabolic processHOM03M000820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030246IEAInterProcarbohydrate binding
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000820

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014766Carboxypeptidase, regulatory domain
IPR010325Rhamnogalacturonate lyase
IPR008979Galactose-binding domain-like
IPR013784Carbohydrate-binding-like fold

Mapman id Description
10.6.3cell wall.degradation.pectate lyases and polygalacturonases
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network