Gene: BD3G39980 (Brachypodium distachyon)

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Gene Identifier
BD3G39980
Transcript Identifier
BD3G39980.1
Gene Type
Coding gene
Location
Bd3 : 42235889-42241010 : positive

Family

Gene family
HOM03M000226
(224 genes in 16 species)
specific family
Subfamily
ORTHO03M000043
(50 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Linoleate 9S-lipoxygenase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameBradi3g39980
RNAnameBradi3g39980.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAInterProoxidation-reduction process
GO:0051707ISOPLAZA Integrative Orthologyresponse to other organismOS08G39840 AT3G45140
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingOS08G39840 AT3G45140
GO:0080027ISOPLAZA Integrative Orthologyresponse to herbivoreAT3G45140
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT3G45140
GO:0009617ISOPLAZA Integrative Orthologyresponse to bacteriumAT3G45140
GO:0009620ISOPLAZA Integrative Orthologyresponse to fungusAT3G45140
GO:0034440ISOPLAZA Integrative Orthologylipid oxidationAT3G45140
GO:0009695ISOPLAZA Integrative Orthologyjasmonic acid biosynthetic processAT3G45140
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT3G45140

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005506IEAInterProiron ion binding
GO:0016165IEAInterProlinoleate 13S-lipoxygenase activity
GO:0016702IEAInterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872IEAInterPrometal ion binding
GO:0016166ISOPLAZA Integrative Orthologyphytoene dehydrogenase activityOS08G39840
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03M000226
GO:0016701IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygenHOM03M000226

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT3G45140
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G45140
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT3G45140
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT3G45140
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G45140

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020834Lipoxygenase, conserved site
IPR013819Lipoxygenase, C-terminal
IPR008976Lipase/lipooxygenase, PLAT/LH2
IPR001246Lipoxygenase, plant
IPR020833Lipoxygenase, iron binding site
IPR001024PLAT/LH2 domain
IPR000907Lipoxygenase
IPR027433Lipoxygenase, domain 3

Mapman id Description
17.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
No SignalP domains detected for this gene.