Gene: BD3G05340 (Brachypodium distachyon)
Overview 
- Gene Identifier
- BD3G05340
- Transcript Identifier
- BD3G05340.1
- Gene Type
- Coding gene
- Location
- Bd3 : 3744331-3749270 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
Lead, cadmium, zinc and mercury-transporting ATPase
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
GeneName | Bradi3g05340 |
RNAname | Bradi3g05340.1 |
Toolbox
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- ...the colinearity of this gene with other genomes.
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- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006825 | IEA | InterPro | copper ion transport | |
GO:0006812 | IEA | InterPro | cation transport | |
GO:0030001 | IEA | InterPro | metal ion transport | |
GO:0010119 | ISO | PLAZA Integrative Orthology | regulation of stomatal movement | AT5G44790 |
GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT5G44790 |
GO:0009873 | ISO | PLAZA Integrative Orthology | ethylene mediated signaling pathway | AT5G44790 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0019829 | IEA | InterPro | cation-transporting ATPase activity | |
GO:0000166 | IEA | InterPro | nucleotide binding | |
GO:0005507 | IEA | InterPro | copper ion binding | |
GO:0046872 | IEA | InterPro | metal ion binding | |
GO:0005375 | ISO | PLAZA Integrative Orthology | copper ion transmembrane transporter activity | AT5G44790 |
GO:0042626 | IEA | PLAZA Homology | ATPase activity, coupled to transmembrane movement of substances | HOM03M000315 |
GO:0042625 | IEA | PLAZA Homology | ATPase activity, coupled to transmembrane movement of ions | HOM03M000315 |
GO:1901265 | IEA | PLAZA Homology | nucleoside phosphate binding | HOM03M000315 |
GO:0016820 | IEA | PLAZA Homology | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | HOM03M000315 |
GO:0015399 | IEA | PLAZA Homology | primary active transmembrane transporter activity | HOM03M000315 |
GO:0015405 | IEA | PLAZA Homology | P-P-bond-hydrolysis-driven transmembrane transporter activity | HOM03M000315 |
GO:0043492 | IEA | PLAZA Homology | ATPase activity, coupled to movement of substances | HOM03M000315 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016021 | IEA | InterPro | integral to membrane | |
GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G44790 |
GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT5G44790 |
GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G44790 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR006122 | Heavy metal-associated domain, copper ion-binding |
IPR001757 | Cation-transporting P-type ATPase |
IPR006121 | Heavy metal-associated domain, HMA |
IPR027256 | Cation-transporting P-type ATPase, subfamily IB |
IPR023214 | HAD-like domain |
IPR023299 | P-type ATPase, cytoplasmic domain N |
IPR008250 | P-type ATPase, A domain |
IPR017969 | Heavy-metal-associated, conserved site |
IPR018303 | P-type ATPase, phosphorylation site |
Mapman id | Description |
---|---|
34.12 | transport.metal |
No SignalP domains detected for this gene.