Gene: BD1G12550 (Brachypodium distachyon)

Overview top

Gene Identifier
BD1G12550
Transcript Identifier
BD1G12550.1
Gene Type
Coding gene
Location
Bd1 : 9456037-9460298 : negative

Family

Gene family
HOM03M006059
(17 genes in 15 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine)
Phosphomethylpyrimidine synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameBradi1g12550
RNAnameBradi1g12550.2

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009228IEAInterProthiamine biosynthetic process
GO:0016045ISOPLAZA Integrative Orthologydetection of bacteriumAT2G29630
GO:0010266ISOPLAZA Integrative Orthologyresponse to vitamin B1AT2G29630
GO:0042724IEAPLAZA Homologythiamine-containing compound biosynthetic processHOM03M006059

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0051536IEAInterProiron-sulfur cluster binding
GO:0080041ISOPLAZA Integrative OrthologyADP-ribose pyrophosphohydrolase activityAT2G29630
GO:0051540IEAPLAZA Homologymetal cluster bindingHOM03M006059

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT2G29630
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT2G29630
GO:0009536ISOPLAZA Integrative OrthologyplastidAT2G29630

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002817Thiamine biosynthesis protein ThiC
IPR025747ThiC-associated domain

Mapman id Description
18.2Co-factor and vitamine metabolism.thiamine
No SignalP domains detected for this gene.