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WorkbenchGene: AT5G64760 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G64760
- Transcript Identifier
- AT5G64760.1
- Gene Type
- Coding gene
- Location
- 5 : 25894027-25896445 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
regulatory particle non-ATPase subunit 5B
- Curated Summary
-
Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous genes RPN5a.
Identifiers
| Identifier | Name |
|---|---|
| alias | regulatory particle non-ATPase subunit 5B |
| alias | RPN5B |
| uniprot | Q8VWK0 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006511 | TAS | Gene Ontology | ubiquitin-dependent protein catabolic process | 1 |
| GO:0030163 | TAS | UniProt | protein catabolic process | 1 2 3 4 5 |
| GO:0007275 | IMP | UniProt | multicellular organismal development | 1 2 3 4 5 |
| GO:0006635 | RCA | Gene Ontology | fatty acid beta-oxidation | 1 |
| GO:0009407 | RCA | Gene Ontology | toxin catabolic process | 1 |
| GO:0042023 | RCA | Gene Ontology | DNA endoreduplication | 1 |
| GO:0043161 | RCA | Gene Ontology | proteasome-mediated ubiquitin-dependent protein catabolic process | 1 |
| GO:0043248 | RCA | Gene Ontology | proteasome assembly | 1 |
| GO:0051510 | RCA | Gene Ontology | regulation of unidimensional cell growth | 1 |
| GO:0051788 | RCA | Gene Ontology | response to misfolded protein | 1 |
| GO:0080129 | RCA | Gene Ontology | proteasome core complex assembly | 1 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | IDA, ISMTAS, | UniProt | nucleus | 1 2 3 4 5 6 7 |
| GO:0008541 | ISS | Gene Ontology | proteasome regulatory particle, lid subcomplex | 1 |
| GO:0005737 | IDA | UniProt | cytoplasm | 1 2 3 4 5 |
| GO:0000502 | IDA | UniProt | proteasome complex | 1 2 3 4 5 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 29.5.11.20 | protein.degradation.ubiquitin.proteasom |
No SignalP domains detected for this gene.