Gene: AT5G61410 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G61410
Transcript Identifier
AT5G61410.1
Gene Type
Coding gene
Location
5 : 24684085-24685836 : negative

Family

Gene family
HOM03M002018
(41 genes in 16 species)
specific family
Subfamily
ORTHO03M004487
(7 genes in 6 species)
specific family

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Descriptions

Description
D-ribulose-5-phosphate-3-epimerase
Curated Summary
Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA
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Identifiers

Identifier Name
aliasEMB2728
aliasD-ribulose-5-phosphate-3-epimerase
aliasRPE
aliasEMBRYO DEFECTIVE 2728

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975ISS, IEAGene Ontologycarbohydrate metabolic process1
GO:0009793NASGene Ontologyembryo development ending in seed dormancy1
GO:0009409IEP, RCAGene Ontologyresponse to cold1 2
GO:0042742RCAGene Ontologydefense response to bacterium1
GO:0009624IMPGene Ontologyresponse to nematode1
GO:0008152IEAInterPrometabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004750ISSGene Ontologyribulose-phosphate 3-epimerase activity1
GO:0016857IEAInterProracemase and epimerase activity, acting on carbohydrates and derivatives
GO:0003824IEAInterProcatalytic activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009941IDAGene Ontologychloroplast envelope1
GO:0009570IDAGene Ontologychloroplast stroma1
GO:0009579IDAGene Ontologythylakoid1
GO:0010319IDAGene Ontologystromule1
GO:0048046IDAGene Ontologyapoplast1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011060Ribulose-phosphate binding barrel
IPR000056Ribulose-phosphate 3-epimerase-like
IPR013785Aldolase-type TIM barrel

Mapman id Description
1.3.11PS.calvin cycle.RPE
No SignalP domains detected for this gene.