Gene: AT5G60410 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G60410
Transcript Identifier
AT5G60410.2
Gene Type
Coding gene
Location
5 : 24295226-24300792 : positive

Family

Gene family
HOM03M001495
(51 genes in 16 species)
specific family
Subfamily
ORTHO03M007542
(5 genes in 4 species)
specific family

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Descriptions

Description
DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
Curated Summary
Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling
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Identifiers

Identifier Name
aliasSIZ1
aliasATSIZ1
uniprotQ680Q4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010286IMPUniProtheat acclimation1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0009864IMPGene Ontologyinduced systemic resistance, jasmonic acid mediated signaling pathway1
GO:0010113IMPUniProtnegative regulation of systemic acquired resistance1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0050826IMPUniProtresponse to freezing1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0009414IMPUniProtresponse to water deprivation1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0040008IMPUniProtregulation of growth1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0048589IMPUniProtdevelopmental growth1 2 3 4 5 6 7 8 9 10 11 12 13
GO:2000070IMPUniProtregulation of response to water deprivation1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0009910IMPUniProtnegative regulation of flower development1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0016925IDAUniProtprotein sumoylation1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0009787IMPUniProtregulation of abscisic acid-activated signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0010337IMPUniProtregulation of salicylic acid metabolic process1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0016049IMPUniProtcell growth1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0051301IMPUniProtcell division1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0010247IDAUniProtdetection of phosphate ion1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0016036IMPUniProtcellular response to phosphate starvation1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0090352IMPUniProtregulation of nitrate assimilation1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0009553IMPUniProtembryo sac development1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0010183IMPUniProtpollen tube guidance1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0048481IMPUniProtovule development1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0006952IEAUniProtdefense response1 2 3 4 5 6 7 8 9 10 11 12
GO:0009908IEAUniProtflower development1 2 3 4 5 6 7 8 9 10 11 12

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISSGene OntologyDNA binding1
GO:0019789IDA, IMP, UniProtSUMO ligase activity1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0003676IEAUniProtnucleic acid binding1 2 3 4 5 6 7 8 9 10 11 12
GO:0008270IEAUniProtzinc ion binding1 2 3 4 5 6 7 8 9 10 11 12

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0016607IEAUniProtnuclear speck1 2 3 4 5 6 7 8 9 10 11 12

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003034SAP domain
IPR001965Zinc finger, PHD-type
IPR011011Zinc finger, FYVE/PHD-type
IPR019787Zinc finger, PHD-finger
IPR004181Zinc finger, MIZ-type
IPR019786Zinc finger, PHD-type, conserved site
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBPHD