Gene: AT5G60110 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G60110
Transcript Identifier
AT5G60110.1
Gene Type
Coding gene
Location
5 : 24201954-24202937 : positive

Family

Gene family
HOM03M000258
(206 genes in 16 species)
specific family
Subfamily
ORTHO03M018623
(2 genes in 1 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
pumilio 18
Curated Summary
Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
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Identifiers

Identifier Name
aliaspumilio 18
aliasPUM18
aliasAPUM18
uniprotQ9LVG3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007059RCAGene Ontologychromosome segregation1
GO:0007129RCAGene Ontologysynapsis1
GO:0007131RCAGene Ontologyreciprocal meiotic recombination1
GO:0042138RCAGene Ontologymeiotic DNA double-strand break formation1
GO:0006417IEAUniProtregulation of translation1 2 3

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEA, ISSUniProtRNA binding1 2 3 4
GO:0005488IEAInterProbinding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IDA, ISM, UniProtcytoplasm1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001313Pumilio RNA-binding repeat
IPR011989Armadillo-like helical
IPR016024Armadillo-type fold

Mapman id Description
35.1.12not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein
No SignalP domains detected for this gene.