Gene: AT5G60020 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G60020
Transcript Identifier
AT5G60020.1
Gene Type
Coding gene
Location
5 : 24168072-24170223 : positive

Family

Gene family
HOM03M000056
(721 genes in 16 species)
specific family
Subfamily
ORTHO03M000005
(114 genes in 13 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
laccase 17
Curated Summary
LAC17 appears to have laccase activity based on enzyme assays performed using lac17 mutants. Notably, these mutants appear to have a reduced deposition of G lignin units. LAC17 is expressed in interfascicular fibers and likely contributes to lignin biosynthesis, and hence, cell wall biosynthesis, there.
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Identifiers

Identifier Name
aliasLAC17
aliaslaccase 17
aliasATLAC17
uniprotQ9FJD5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009698IMPGene Ontologyphenylpropanoid metabolic process1
GO:0009809IMPUniProtlignin biosynthetic process1 2 3 4
GO:0009832RCAGene Ontologyplant-type cell wall biogenesis1
GO:0010413RCAGene Ontologyglucuronoxylan metabolic process1
GO:0045492RCAGene Ontologyxylan biosynthetic process1
GO:0046274IEAUniProtlignin catabolic process1 2 3
GO:0055114IEAInterProoxidation-reduction process
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03M000056
GO:0044699IEAPLAZA Homologysingle-organism processHOM03M000056

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IMP, IEA, UniProtoxidoreductase activity1 2 3 4
GO:0005507IEAUniProtcopper ion binding1 2 3
GO:0052716IEAUniProthydroquinone:oxygen oxidoreductase activity1 2 3
GO:0043169IEAPLAZA Homologycation bindingHOM03M000056
GO:0043167IEAPLAZA Homologyion bindingHOM03M000056
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03M000056
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000056
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03M000056

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0048046IEAUniProtapoplast1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001117Multicopper oxidase, type 1
IPR008972Cupredoxin
IPR011707Multicopper oxidase, type 3
IPR017761Laccase
IPR011706Multicopper oxidase, type 2
IPR002355Multicopper oxidase, copper-binding site

Mapman id Description
16.10secondary metabolism.simple phenols
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network